An Extensible De-Identification Framework for Privacy Protection of Unstructured Health Information: Creating Sustainable Privacy InfrastructuresStefano BraghinJoao Bettencourt-Silvaet al.2019MEDINFO 2019
Bridging Clinical and Social Determinants of Health Using Unstructured DataJoao Bettencourt-SilvaNatasha Mulliganet al.2018EFMI STC 2018
Designing digital goal support systems for multimorbidity self-management: Insights from older adults and their care networkJulie DoyleEmma Murphyet al.2018PervasiveHealth 2018
Note Highlights: Surfacing Relevant Concepts from Unstructured Notes for Health ProfessionalsVanessa LopezJoao H. Bettencourt-Silvaet al.2017ICHI 2017
Pragmatic De-Identification of Cross-Domain Unstructured Documents: A Utility-Preserving Approach with Relation Extraction FilteringLiubov NedoshivinaAnisa Halimiet al.2024AMIA Informatics Symposium 2024
Investigating Cross-Domain Binary Relation Classification in Clinical Natural Language ProcessingAlberto PurpuraNatasha Mulliganet al.2024AMIA Informatics Symposium 2024
Combining digital trends and scientific literature: a case study on Social Determinants of COVID-19Joao Bettencourt-SilvaConor Cullenet al.2021EPHC 2021
Improving Health-Status Classification for Epithelial Cells of Inflammatory Bowel Disease using a Transcriptomic Biomedical Foundation ModelToshiya IwamoriVibha Anandet al.2024ISMB 2024
Cross Dataset Verification of Cell Type Annotation using a Transcriptomic Biomedical Foundation Model: Inflammatory Bowel Disease Use CaseAkihiro KosugiVibha Anandet al.2024ISMB 2024
Contextualizing Single-Cell Analyses: An AI Pipeline for Evidence Search from Literature and Gene DatabasesJoao Bettencourt-SilvaNatasha Mulliganet al.2024ISMB 2024