Matching single cells across modalities with contrastive learning and optimal transport
- Federico Gossi
- Pushpak Pati
- et al.
- 2023
- Briefings in Bioinformatics
Publications
Date
Featured collections
Popular topics
22 results for Marianna Rapsomaniki
ChromFormer: A transformer-based model for 3D genome structure prediction
- Henry Valeyre
- Pushpak Pati
- et al.
- 2022
- NeurIPS 2022
A stochastic hybrid model for DNA replication incorporating protein mobility dynamics
- Jonas Windhager
- Amelia Paine
- et al.
- 2022
- bioRxiv
scQUEST: Quantifying tumor ecosystem heterogeneity from mass or flow cytometry data
- Adriano Luca Martinelli
- Johanna Wagner
- et al.
- 2022
- STAR Protocols
Learning a single-cell map of Acute Myeloid Leukaemia with auto-encoders
- Alice Driessen
- Susane Unger
- et al.
- 2022
- ISMB 2022
Quantification of tumor heterogeneity: from data acquisition to metric generation
- Aditya Kashyap
- Maria Anna Rapsomaniki
- et al.
- 2022
- TIBTECH
ATHENA: analysis of tumor heterogeneity from spatial omics measurements
- Adriano Luca Martinelli
- Maria Anna Rapsomaniki
- 2022
- Bioinformatics
Modeling the Three-Dimensional Chromatin Structure from Hi-C Data with Transfer Learning
- Tristan Meynier
- Marianna Rapsomaniki
- 2021
- NeurIPS 2021
Spatial protein heterogeneity analysis in frozen tissues to evaluate tumor heterogeneity
- Anna Fomitcheva Khartchenko
- Maria Anna Rapsomaniki
- et al.
- 2021
- PLoS ONE
A Single-Cell Atlas of the Tumor and Immune Ecosystem of Human Breast Cancer
- Johanna Wagner
- Maria Anna Rapsomaniki
- et al.
- 2019
- Cell